MS Biomedical Data Science

2 Years On Campus Masters Program

Stanford University

Program Overview

The Master of Science in Biomedical Data Science (MS BMDS) at Stanford University is a STEM-designated, interdisciplinary graduate program that prepares students to apply statistical, computational, and machine learning techniques to address complex problems in biomedical and health data.

Offered by the Department of Biomedical Data Science within the Stanford School of Medicine, the program is ideal for students with strong backgrounds in quantitative science who are interested in advancing healthcare, biomedical research, and public health through data-driven innovation.

Program Format & Duration

  • Full-time, residential program

  • Duration: Typically 2 years

  • STEM-designated (international students eligible for up to 3 years OPT)

  • Fall start only

  • Requires a strong quantitative and computing background

  • GRE not required


Core Curriculum Components

The MS BMDS curriculum is designed to provide rigorous training in statistics, computer science, and biology, with an emphasis on methods for analyzing complex biomedical data.

Core Requirements

Students complete coursework in five foundational areas:

  1. Biostatistics and Statistical Modeling

    • Probability for Statisticians

    • Linear Models

    • Statistical Inference

    • Survival Analysis

  2. Computation and Data Management

    • Algorithms

    • Programming for Data Science (Python/R)

    • Data Structures

    • Databases and Biomedical Informatics Tools

  3. Machine Learning and AI

    • Foundations of Machine Learning

    • Deep Learning in Genomics and Medicine

    • Causal Inference and Predictive Modeling

  4. Biomedical Applications

    • Genomics and High-Throughput Data

    • Clinical Informatics

    • Population Health Analytics

    • Imaging Informatics

  5. Ethics and Responsible Data Use

    • Ethical, Legal, and Social Implications of Biomedical Data

    • Data Privacy and Health Equity

Electives

Students may tailor their degree by choosing electives in:

  • NLP in Healthcare

  • Computational Neuroscience

  • Public Health and Policy

  • Health Economics

  • Biomedical Entrepreneurship

Experiential Learning (Research, Projects, Internships etc.)

Stanford’s MS BMDS program emphasizes hands-on, translational learning that bridges classroom knowledge with real-world biomedical research and health care systems.

Capstone or Research Project

  • Students typically complete a substantial research or capstone project in their second year

  • Projects are often embedded within Stanford's many labs or research institutes, and may involve:

    • Clinical trial analysis

    • Genomic data interpretation

    • AI applications in diagnostics or treatment planning

    • Health system optimization using EHRs

Lab Affiliations & Research Centers

Students may collaborate with or pursue research in:

  • Stanford Center for Biomedical Informatics Research (BMIR)

  • Department of Genetics

  • Stanford AI in Medicine & Imaging (AIMI)

  • Clinical Excellence Research Center (CERC)

  • Quantitative Sciences Unit (QSU)

Internships & Industry Exposure

  • While not a formal part of the curriculum, students benefit from proximity to Silicon Valley's biotech and health tech ecosystem, including opportunities for summer internships, hackathons, and research assistantships

  • Common partners: Google Health, Verily, Genentech, Kaiser Permanente, and startups focused on digital health and genomics

Progression & Future Opportunities

Graduates of the MS BMDS program are exceptionally prepared for high-impact roles at the intersection of data science, biology, and healthcare. They bring critical expertise in computational tools and statistical thinking to some of the most pressing challenges in biomedical research and personalized medicine.

Career Outcomes

Graduates typically move into roles such as:

  • Biomedical Data Scientist

  • Clinical AI Developer

  • Genomic Data Analyst

  • Computational Biologist

  • Health Informatics Specialist

  • Bioinformatics Engineer

  • Applied Research Scientist (HealthTech/Pharma)

Top Employment Sectors

  • Academic medical centers and hospitals

  • Biotech and pharmaceutical companies

  • Digital health startups

  • Research labs and think tanks

  • Public health agencies (CDC, WHO, NIH)

Further Education & Research

Many graduates go on to:

  • PhD programs in biomedical informatics, computational biology, or biostatistics

  • MD or MD/PhD tracks with a focus on clinical data

  • Postgraduate fellowships at Stanford or institutions worldwide

  • Roles in health policy or global health analytics

Salary Overview

  • Average Starting Salary: ~$90,000–$110,000 USD

  • Overall Range: $75,000–$135,000

  • Signing Bonuses: Up to $10,000 reported

  • Employment Rate: ~85% employed within 3–6 months of graduation

  • Many graduates also pursue PhD or MD-PhD pathways at top research institutions

 

Top Employers

BMDS graduates are employed by leading organizations in biotech, tech, and public health sectors, including:

  • Genentech

  • Google Health / Verily Life Sciences

  • FDA / CDC / NIH

  • Stanford Medicine & Research Institutes

  • Pfizer / Roche / Illumina

  • Amazon Web Services (Health AI teams)

 

Geographic Placement

  • San Francisco Bay Area: 45%

  • Boston / Cambridge: 18%

  • Seattle / New York City: 10%

  • Remote / Hybrid Roles: Growing trend

  • Global Placements: Especially common among research-focused and biotech alumni

 

Industry Sectors

Graduates work across a range of high-impact industries, such as:

  • Biotech & Pharma (drug discovery, translational research)

  • Healthcare AI & Genomics (predictive modeling, health tech startups)

  • Government & Public Health (bioinformatics roles at national agencies)

  • Academia & Research (data-intensive labs and centers)

  • Tech & Cloud Platforms (ML/AI-driven healthcare solutions)

 

 Career Growth & Progression

Typical career trajectory of Stanford BMDS graduates:

  • Entry-Level: Research Analyst, Bioinformatics Associate

  • Mid-Level: Senior Data Scientist, Machine Learning Engineer

  • Advanced Roles: Team Lead, AI Health Strategist, Principal Scientist

Many graduates leverage Stanford’s ecosystem to:

  • Step into leadership roles in biotech or health-tech

  • Launch startups in data-driven healthcare

  • Transition into PhD or advanced research positions

 

Career Highlights Summary

  • Salary: Avg ~$90K (Range $75K–$135K), with potential $10K signing bonus

  • Roles: Bioinformatics, Biostatistics, Machine Learning, Health AI

  • Employers: Genentech, Google Health, NIH, Stanford, AWS

  • Locations: SF Bay Area (45%), Boston (18%), Remote/Hybrid growing

  • Employment Rate: 85% within 3–6 months of graduation

 

What This Means for You

  • High earning potential right after graduation—especially in biotech and ML roles

  • Specialization advantage in genomics, healthcare AI, and precision medicine

  • Strategic location access to top-tier research centers and Silicon Valley firms

  • Accelerated career pathways into innovation, leadership, or advanced academia

Program Key Stats

$61,095
$ 125
Aug Intake : 3rd Dec


3.7 %
No
No
Yes
Yes

Eligibility Criteria

3.0
3 Year

NA
NA
NA
NA
NA
100
2:1

Additional Information & Requirements

Career Options

  • Biomedical Data Scientist
  • Clinical Data Analyst
  • Biostatistician
  • Machine Learning Engineer
  • Genomics Data Analyst
  • Bioinformatics Scientist
  • Health Data Scientist
  • Research Scientist (AI in Healthcare)
  •  Data Analyst
  • Data Scientist
  • Business Analyst
  • Statistician
  • Statistical Programmer
  • SAS Programmer
  • Machine Learning Engineer
  • Deep Learning Engineer
  • AI Researcher
  • Data Engineer
  • BI Developer
  • Data Architect
  • Analytics Consultant
  • Advisory Consultant
  • Quantitative Analyst
  • Risk Analyst
  • Operations Analyst
  • Marketing Analyst
  • Research Scientist
  • Insights Analyst
  • Forecasting Analyst
  • Healthcare Data Analyst
  • Financial Data Analyst
  • Product Analyst

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