The Master of Science in Biomedical Data Science (MS BMDS) at Stanford University is a STEM-designated, interdisciplinary graduate program that prepares students to apply statistical, computational, and machine learning techniques to address complex problems in biomedical and health data.
Offered by the Department of Biomedical Data Science within the Stanford School of Medicine, the program is ideal for students with strong backgrounds in quantitative science who are interested in advancing healthcare, biomedical research, and public health through data-driven innovation.
Program Format & Duration
Full-time, residential program
Duration: Typically 2 years
STEM-designated (international students eligible for up to 3 years OPT)
Fall start only
Requires a strong quantitative and computing background
GRE not required
Core Curriculum Components
The MS BMDS curriculum is designed to provide rigorous training in statistics, computer science, and biology, with an emphasis on methods for analyzing complex biomedical data.
Core Requirements
Students complete coursework in five foundational areas:
Biostatistics and Statistical Modeling
Probability for Statisticians
Linear Models
Statistical Inference
Survival Analysis
Computation and Data Management
Algorithms
Programming for Data Science (Python/R)
Data Structures
Databases and Biomedical Informatics Tools
Machine Learning and AI
Foundations of Machine Learning
Deep Learning in Genomics and Medicine
Causal Inference and Predictive Modeling
Biomedical Applications
Genomics and High-Throughput Data
Clinical Informatics
Population Health Analytics
Imaging Informatics
Ethics and Responsible Data Use
Ethical, Legal, and Social Implications of Biomedical Data
Data Privacy and Health Equity
Electives
Students may tailor their degree by choosing electives in:
NLP in Healthcare
Computational Neuroscience
Public Health and Policy
Health Economics
Biomedical Entrepreneurship
Stanford’s MS BMDS program emphasizes hands-on, translational learning that bridges classroom knowledge with real-world biomedical research and health care systems.
Capstone or Research Project
Students typically complete a substantial research or capstone project in their second year
Projects are often embedded within Stanford's many labs or research institutes, and may involve:
Clinical trial analysis
Genomic data interpretation
AI applications in diagnostics or treatment planning
Health system optimization using EHRs
Lab Affiliations & Research Centers
Students may collaborate with or pursue research in:
Stanford Center for Biomedical Informatics Research (BMIR)
Department of Genetics
Stanford AI in Medicine & Imaging (AIMI)
Clinical Excellence Research Center (CERC)
Quantitative Sciences Unit (QSU)
Internships & Industry Exposure
While not a formal part of the curriculum, students benefit from proximity to Silicon Valley's biotech and health tech ecosystem, including opportunities for summer internships, hackathons, and research assistantships
Common partners: Google Health, Verily, Genentech, Kaiser Permanente, and startups focused on digital health and genomics
Graduates of the MS BMDS program are exceptionally prepared for high-impact roles at the intersection of data science, biology, and healthcare. They bring critical expertise in computational tools and statistical thinking to some of the most pressing challenges in biomedical research and personalized medicine.
Career Outcomes
Graduates typically move into roles such as:
Biomedical Data Scientist
Clinical AI Developer
Genomic Data Analyst
Computational Biologist
Health Informatics Specialist
Bioinformatics Engineer
Applied Research Scientist (HealthTech/Pharma)
Top Employment Sectors
Academic medical centers and hospitals
Biotech and pharmaceutical companies
Digital health startups
Research labs and think tanks
Public health agencies (CDC, WHO, NIH)
Further Education & Research
Many graduates go on to:
PhD programs in biomedical informatics, computational biology, or biostatistics
MD or MD/PhD tracks with a focus on clinical data
Postgraduate fellowships at Stanford or institutions worldwide
Roles in health policy or global health analytics
Salary Overview
Average Starting Salary: ~$90,000–$110,000 USD
Overall Range: $75,000–$135,000
Signing Bonuses: Up to $10,000 reported
Employment Rate: ~85% employed within 3–6 months of graduation
Many graduates also pursue PhD or MD-PhD pathways at top research institutions
Top Employers
BMDS graduates are employed by leading organizations in biotech, tech, and public health sectors, including:
Genentech
Google Health / Verily Life Sciences
FDA / CDC / NIH
Stanford Medicine & Research Institutes
Pfizer / Roche / Illumina
Amazon Web Services (Health AI teams)
Geographic Placement
San Francisco Bay Area: 45%
Boston / Cambridge: 18%
Seattle / New York City: 10%
Remote / Hybrid Roles: Growing trend
Global Placements: Especially common among research-focused and biotech alumni
Industry Sectors
Graduates work across a range of high-impact industries, such as:
Biotech & Pharma (drug discovery, translational research)
Healthcare AI & Genomics (predictive modeling, health tech startups)
Government & Public Health (bioinformatics roles at national agencies)
Academia & Research (data-intensive labs and centers)
Tech & Cloud Platforms (ML/AI-driven healthcare solutions)
Career Growth & Progression
Typical career trajectory of Stanford BMDS graduates:
Entry-Level: Research Analyst, Bioinformatics Associate
Mid-Level: Senior Data Scientist, Machine Learning Engineer
Advanced Roles: Team Lead, AI Health Strategist, Principal Scientist
Many graduates leverage Stanford’s ecosystem to:
Step into leadership roles in biotech or health-tech
Launch startups in data-driven healthcare
Transition into PhD or advanced research positions
Career Highlights Summary
Salary: Avg ~$90K (Range $75K–$135K), with potential $10K signing bonus
Roles: Bioinformatics, Biostatistics, Machine Learning, Health AI
Employers: Genentech, Google Health, NIH, Stanford, AWS
Locations: SF Bay Area (45%), Boston (18%), Remote/Hybrid growing
Employment Rate: 85% within 3–6 months of graduation
What This Means for You
High earning potential right after graduation—especially in biotech and ML roles
Specialization advantage in genomics, healthcare AI, and precision medicine
Strategic location access to top-tier research centers and Silicon Valley firms
Accelerated career pathways into innovation, leadership, or advanced academia
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